Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITLKSRREIDEMKAAGKILADTHKELKKIIKPGITSWDLEVFTEEFL-RKNGATPEQKGFEGYEYAICASINDEICHGFPRKQKL-NQGDIITVDMVVNYHGALADSAWTYAVGEVPDDVKHLMDVTHKALYLGIEQAQVGARVGDIGHAIQTYVESENLAVVREFIGHGVGPTLHEKPDIPHYGTAGKGPRLKEGMVITVEPMVNMGAWKAKMDDNGWTARTVDGSLSAQYEHTFAITKDGPEILTYQGEND
2EVO Chain:A ((4-254))
--SIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDD-
General information:
TITO was launched using:
RESULT:
Template:
2EVO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100382 for 2198 contacts (-45.7/contact) +
2D Compatibility (PS) -26894 + (NN) -12305 + (LL) 336
1D Compatibility (HY) -18800 + (ID) 4550
Total energy: -162595.0 ( -73.97 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_2EVO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EVO-query.scw
PDB file :
Tito_Scwrl_2EVO.pdb
: