Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAGKTTVGNILANLADLPYIDIDEVITSEQGMSVSDIFAKYGEKEFRRLEHEKLKELATTKA--VIATGGGIVLNPENREVLKNTYPVIYLETDPEVFMNRL--KGDTTRPLVQQKTAEEIRAIFEPRIAHYQDSADFIVNTD---NRNQQEVAQTILTMLDK
3MUF Chain:A ((16-167))
MGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELKTLKTPHVISTGGGIVMH----ENLKGLGTTFYLKMDFETLIKRLNQKEREKRPLLNNLT--QAKELFEKRQALYEKNASFIIDARGGLNNSLKQVLQFI------
General information:
TITO was launched using:
RESULT:
Template:
3MUF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43275 for 1005 contacts (-43.1/contact) +
2D Compatibility (PS) -15184 + (NN) -742 + (LL) 832
1D Compatibility (HY) -12000 + (ID) 2850
Total energy: -73219.0 ( -72.85 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_3MUF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MUF-query.scw
PDB file :
Tito_Scwrl_3MUF.pdb
: