Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFAVIQFPGSNCDLDMLHAIRDSLGEEAEYIWHAETSLAGFDAVLLPGGFSYGDYLRTGAIAKFSSIMPEVLRFAEMGKPVLGVCNGFQILTEIGLLPG----------ALIRNNNLHFICKTVPLRVANASTMFTELYEEGEIIQVPVAHGEGNYYCDDETLLKLKENNQIVFTYDSVNPNGSRADIAGIVNERGNVLGMMPHPERAVEEIIGGTDGLRLFESVVKAWKEEQVNA |
2YWJ Chain:A ((1-185)) | MIIGVLAIQGD--VEEHEEAIKK-AGYEAKKVKRVE-DLEGIDALIIPGGESTA-IG------KLMKKYGLLEKIKNSNLPILGTCAGMVLLSKG--TGINQILLELMDITVKRNAYG-----R-QVDSFE-KEIEFKDLG--KVYGVF-IRAPVVD---K----IL-SDDVEVIARD---GD-KIVGVK-----QGKYMALSFHPELSE-------DGYKVYKYFVENCVK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64460 for 1466 contacts (-44.0/contact) +
2D Compatibility (PS) -18198 + (NN) -2899 + (LL) 2968
1D Compatibility (HY) -7200 + (ID) 1850
Total energy: -91639.0 ( -62.51 by residue)
QMean score : 0.362
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