Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MTFFKKLKDKITQQTDSVSGKFKDGLSKTRGNFSGKINEMVARYRK----VDEDFFEELEEI---LIGADVGFETVMELVDTLRREVQLRNISDPKDVQEVIVEKLVEIYQGDEKEDEALHIEEDGLTVILFVGVNGVGKTTSIGKMAHRFKQEGKKVMLAAGDTFRAGAIDQLEVWGERTGVDVIKQAEGSDPAAVMFDAVQAAKARKADILLCDTAGRLQNKVNLMNELEKVKRVITREIPNAPHEVLLVLDATTGQNAFVQAKQFKETTDVTGIILTKLDGTAKGGIVIAIRNELDIPVKFVGLGEQMDDLQAFDANEYVYGLFADMVDNEK 1JPN Chain:B ((4-282)) -------------------------------QLSARLQEAIGRLRGRGRITEEDLKATLREIRRALMDADVNLEVARDFVERVREEALGKQVLESLTPAEVILATVYEALKEALGGEARLPVLKD-RNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEVL------GPDEVLLVLDAMTGQEALSVARAFDEKVGVTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPF------------------

General information: TITO was launched using: RESULT: Template: 1JPN.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output 3D Compatibility (PKB) -140682 for 2230 contacts (-63.1/contact) + 2D Compatibility (PS) -29984 + (NN) -18460 + (LL) 2672 1D Compatibility (HY) -16800 + (ID) 5000 Total energy: -208254.0 ( -93.39 by residue) QMean score : 0.528

(partial model without unconserved sides chains): PDB file : Tito_1JPN.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1JPN-query.scw PDB file : Tito_Scwrl_1JPN.pdb: