Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VTFERLGTMNVNAEGHLEIGGVDTLKLADKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSGGELFTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIMDEVRDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLSL |
| 2QGH Chain:A ((23-419)) | ----------------------NYEELFQTHKTPFYLYDFDKIKQAFLNYKEAFKG--RKSLICYALKANSNLSILSLLAHLESGADCVSIGEIQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEK--EALEMFLWAK-KSAFLEPVSVHFHIGSQLLDLEPIIEASQKVAKIAKSL-IALGIDLRFFDVGGGIGVSYENEE-TIKLYDYAQGILNALQG-------LDLTIICEPGRSIVAESGELITQVLYEKK---NKRFVIVDAGMNDFLRPSLYHAKHAIRVITPS---EISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPKLLELALED-KIRVIRKREALEDLWRLEE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QGH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253906 for 3395 contacts (-74.8/contact) +
2D Compatibility (PS) -42569 + (NN) -18696 + (LL) 1948
1D Compatibility (HY) -23600 + (ID) 6400
Total energy: -343223.0 ( -101.10 by residue)
QMean score : 0.530
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