Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVPFRRTSKAKKRKRRTHVKLQLPGMNECSNCGEYRLSHHVCPECGQYDGKDVANS
1J5A Chain:M ((6-57))
--VPKKKTSKSKRDMRRSHHALTAPNLTECPQCHGKKLSHHICPNCGYYDGRQV---
General information:
TITO was launched using:
RESULT:
Template:
1J5A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 198954 for 1176 contacts (169.2/contact) +
2D Compatibility (PS) -5164 + (NN) -2552 + (LL) 532
1D Compatibility (HY) 0 + (ID) 750
Total energy: 191020.0 ( 162.43 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_1J5A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J5A-query.scw
PDB file :
Tito_Scwrl_1J5A.pdb
: