Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVIVACGSGVATSQTVASKVERILKE-KGVRATVEAVDIKSLE-QHIKTSDVYVAITKANKEFDIPTLNGIAFLTGMGMDEETEKLLNALK
2ARK Chain:A ((4-63))
MGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVR--LKHVDEATKEDVLWADGLAVGSPTN-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ARK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33014 for 371 contacts (-89.0/contact) +
2D Compatibility (PS) -6490 + (NN) -3307 + (LL) 2348
1D Compatibility (HY) -400 + (ID) 450
Total energy: -41313.0 ( -111.36 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_2ARK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ARK-query.scw
PDB file :
Tito_Scwrl_2ARK.pdb
: