Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------MDFSNMSILHYLANIVDILVVWFVIYKVIMLIRGTKAVQLL------------KGIFIIIAVKLLSGFF-------GLQTVEWITDQM------LT--WGFLAIIIIFQPELRRALETLGRG----------------NIFTRYGSRI-------EREQHHLIESI--------EKSTQYMAKRRIGALISVARDTGMDDYIETGIPLNAKISSQL---LINIFIPNTPLHDGAVIIKGNEIASA-----------------------ASYLPLSDSPFLSK-ELGTRHRAALGISEVTD--SITIVVSEETGGISLTKGGELFRDVSEEELHKILLKELVTVTAKKPSIFSKWKGGKSE |
| 4D10 Chain:C ((3-403)) | SALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLFVKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128685 for 1629 contacts (-79.0/contact) +
2D Compatibility (PS) -28649 + (NN) -8679 + (LL) 0
1D Compatibility (HY) -11600 + (ID) 2250
Total energy: -179863.0 ( -110.41 by residue)
QMean score : 0.314
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