Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKKIPFIIQYVKSTLGPTAI-FEGRKVLKFWQMVIVFIFLNALLLLPVSAHFANQSSFDLP-SLMPKMATLGTDQLASKISGLTLENGALTDKNAHIVEKTVNGVAGVNLTKAELSGAKNVINFKDQEMTLTDASGYNFEVSYPKDATLSEITSGESLVDWVSAQWYLENQAFVFLSMVLMIGSIIFVSSLMLTVFTTLFIWMTKRSSFSSIASFKESVNLTLNALGIPVIAACIIGFIYFDITIIMAVQSLGMVLMIAWTFLKTRFYKTSEKSMAASR |
| 3V68 Chain:A ((2-249)) | IERILEFTAKHEEWIVGENVEDFTNENIAMFLSRVSNTVSSKIPGYLGEKIDVNGLLSIKIEGSLEEKLKALISPKVSRQIGRLVMEDD-------KKLKKLLVEVAKAVLTREILKN-ELPIEFPGGKI-----EGLKIQPRYEEDHINFTARYG----SWIVVKRMIIDEKTPLLDIARLLASINETAVNKIKDFADV--------DDKKIVEYFGGFKKVKKEEEIKEIVQLFREFKGNEFEVRYAAREMLSKLGLKVDVPSKNLEKYLE------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V68.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200442 for 1978 contacts (-101.3/contact) +
2D Compatibility (PS) -25031 + (NN) 2113 + (LL) 2852
1D Compatibility (HY) -4800 + (ID) 1950
Total energy: -227258.0 ( -114.89 by residue)
QMean score : 0.224
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