Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILE----EKREAA-AEKGL--KIYESFEAVLADEKVDAVLIATPNDSHKELAITALEAGKHVVCEKPVTMTSEDLLAIMDVAKK--VNKHFMVHQNRRWDEDFLIIKEIFEQKTIGEMFHLESRVHGANGIPGDWRHLKAHGGGMVLDWGVHLLDQLLFLVDSNVKSVSANLSFALG---DEVDDGFVTFITFENGITAQIEVGTTNFIK-----LPRWYVKGTEGTGIIHDWDLSGEIVQPTALAKTSEPTPIKAGQGLTKTMAPPSEEATNTLSLPAPAKLAPSFYNNFIDVLNNTSEPIVQNEEVYQVLKLIEAIFEAAETNRTIHSI |
3IP3 Chain:A ((2-328)) | --SLKICVIGSSGHFRYALEGLD--EECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNEVFFTAMFGIRYRPHFLTAKKLVSEGAVGEIRLVNTQKSYKLGQRPDFYKKRETYGGTIPWVGIHAIDWIHWITGKKFLSVYATHSRLHNSGHGELETTALCHFTLENEVFASLSIDYLRPQGAPTHDDDRMRIVGTRGIVEVINER----VFLTDEK-------------GH------------R--EVP--LVEKGQIFEDFLREIRGQGKCMVTPEDSILTTEIALKARLSADTGQIVL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216548 for 2643 contacts (-81.9/contact) +
2D Compatibility (PS) -33833 + (NN) -13301 + (LL) 2132
1D Compatibility (HY) -9600 + (ID) 3200
Total energy: -274350.0 ( -103.80 by residue)
QMean score : 0.551
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