Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLDEKTKIYDITIIGGGPVGLFAAFYAGMRNASVKIIESLPQLGGQLSTLYPEKYIYDIPGYPSVRAQELVNNLIQQMKPFDPTVALEEAVQSVEKQVDGTFEIITK-KDTHYSKAIIITAGNGAFEPRRLDLPEAEQYEGTNIHYFINDL-SRFSGRRVAVCGGGDSAVDWALMLEKVASSVAIVHRRNAFRAHEHSVNN-LEKSSIAIKTPFIPTEVLGNGDKLTHITLQEVKGDTTETLEIDDFIINYGFVSSLGPIKNWGLELER-NSIVVNSKMETSIPGIYCAGDICTYDGKVKLIATGFGEAPTAVNNAMNFIDPKTRVQPMHSTSLFE
3F8D Chain:A ((12-319))---PGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAG---IVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENR---EFVVKTKRKGEFKADSVILGIGV---KRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDK-VVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK-------------


General information:
TITO was launched using:
RESULT:

Template: 3F8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -248279 for 2653 contacts (-93.6/contact) +
2D Compatibility (PS) -32271 + (NN) -9922 + (LL) 1272
1D Compatibility (HY) -18400 + (ID) 3850
Total energy: -311450.0 ( -117.40 by residue)
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_3F8D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3F8D-query.scw
PDB file : Tito_Scwrl_3F8D.pdb: