Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSALELKNVSFSRKRDFEMKNVSASIPEGKITTLIGPNGSGKSTMLRLMMRLLTPDSGEILLNEKNITEIPSKD-----LAKKMTMLSQAPEGLVDVMVHDLVAYGRLPHRSWLSTLQEEDEAVIHWAIKVCNLEELAYRPLHSLSGGERQRAWLAMALAQKTPILLLDEPTTYLDIAHQLELLDLLVHLNKEYNLTIVLVLHDLNQAAIYSDHVFVCENGQLVKDGSPREVFTTELLRDVFHITADITEKDGKQHIHPLASTRFEY
2OLK Chain:B ((40-247))
-------------------LKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLK---AKDTNLNKVREEVGMVFQRFNLFPHMTVLNNITLAPMKVRKW---PREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANE-GMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLF----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OLK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141230 for 1609 contacts (-87.8/contact) +
2D Compatibility (PS) -22360 + (NN) -14438 + (LL) 4540
1D Compatibility (HY) -14400 + (ID) 3350
Total energy: -191238.0 ( -118.86 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_2OLK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OLK-query.scw
PDB file :
Tito_Scwrl_2OLK.pdb
: