Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGIAVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHRESIH-------KKAKFYEGDIRDKAFLSSVFEKEKVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLEVMEEFDVKHIVFSSSAATYGEPERVPITEDMPT-NPESTYGETKLIMEKMMKWCDKAYGMKFVAL-RYFNVAGAKADGSIGEDHKP-ESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYVQVEDLIDAHIRALEYLKNGGESNIFNLGSSNGFSVKEMLEAARTVTGKEIPAEVVPRRAGDPGTLIASSDKAREILGWEPTYTDVKDIIATAWKWHVSHPNGY |
| 1KVR Chain:A ((1-336)) | MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSAATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRT-LDEMAQDTWHWQSRHPQGY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KVR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174788 for 2916 contacts (-59.9/contact) +
2D Compatibility (PS) -35378 + (NN) -16891 + (LL) -76
1D Compatibility (HY) -26000 + (ID) 6750
Total energy: -259883.0 ( -89.12 by residue)
QMean score : 0.582
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