Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKLNEALKKAERIVFLTGAGVSVPSGIPDYRSKNGLY-----AGMSSPEYMLSHTCLVREPEKFYQFVTENMYYPNAVPNVIHKKMAEIETE-----KDVTIITQNIDGLHEKAGSKKVVNFHGSLYHCYCQNCGM----------------------TVTAK---DYLKSDIHTDCGGVIRPDVVLYEEAISESAIDQSLTAIRKADLIVIVGTSFRVSPFCNLTDYRNKKARIFAVNKERISLPYPFEMMESDAVKVFEEI |
4UUA Chain:B ((13-229)) | LTAFREHFAKAKHIAIITGAGVSAESGVPTFRGPGGFWRKWQAQDLATPEAFSRDPSLVWE---FYHYRREVMR--SKMPNPAHLAIAECEARLGQQGRSVVIITQNIDELHHRAGSKHVYEIHGSLFKTRCMSCGEVKANHKSPICPALDGKGAPDPNTKEARIPVELLPRCERKSCNGLLRPHVVWFGETLDSDILTAVERELEKCDLCLVVGTSSIVYP------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4UUA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -66246 for 1279 contacts (-51.8/contact) +
2D Compatibility (PS) -19950 + (NN) -5702 + (LL) 3536
1D Compatibility (HY) -14400 + (ID) 3550
Total energy: -106312.0 ( -83.12 by residue)
QMean score : 0.509
|
|
|