Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MTLYIIANPHAGNKNASTIVGKIQELYHTE--DISVFYTEQKDDEKKQVINILRSFKESDHLMIIGGDGTLSKVMTYL---PQHIPCAYYPVGSGNDFARALKIP-NLKETLTAIQTERLKEINCFIYDKGLILNSLDLGFAAYVVWKASNSKIKNILNRYRLGKITYIVIAIKSLLHSSKVQVLVEGETGQQIKLNDLYFFA-LANNTYFGGGITIWPKASALTAELDMVYAKGHTFLKRLSILLSLVFKRHTTSKSIKHQTFKAMTVYFPKNSLIEIDGEIVELDQISLKCQKRY-LYM---- |
| 3S40 Chain:A ((3-300)) | KTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFASKV---DLIIVFGGDGTVFECTNGLAPLEIRPTLAIIPGGTCNDFSRTLGVPQNIAEAAKLITKEHVKPVDVAKANGQHFLNFWGIGKIGYYL----------------------------STIETFPVKITYDG-----QVYEDEAVLVMVGNGEYLGGIPSFIPNVKCDDGTLDIFVVKSTG-IQAFKDYIGKKLFEDSNENDIFHVKAKSIHIETEEEKEVDTDSSLHTPCQIELLQGHFTMIYNPAVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S40.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132717 for 2091 contacts (-63.5/contact) +
2D Compatibility (PS) -27034 + (NN) 204 + (LL) 2996
1D Compatibility (HY) -5600 + (ID) 2300
Total energy: -164451.0 ( -78.65 by residue)
QMean score : 0.438
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