Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIYDHLLNLTHYKDINPNLDLAIDYLLSHDLRNLDIGTYHISPEVILMVQSNQLSESFDHIFEYHKKYLDIHYVIEGHEVIKLGKGDKVEVEEYLGDIGFIKCSEETSFDLRDNYIAFFFPEEAHQPNGMGSLGNYVKKGVLKVLMA
4TYZ Chain:A ((1-109))
NIEGVFRKS--FPDLAGETLLDSFNCAWVEGSALKQGYLFITPH-WLCFQSTLAAA------HFSIEYDEIKDIIKSKSVKMFE--NAIEVKTHLNDTIFLT-----NFLQRDQAYSALMSQWLK----------------------
General information:
TITO was launched using:
RESULT:
Template:
4TYZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19770 for 752 contacts (-26.3/contact) +
2D Compatibility (PS) -11044 + (NN) 876 + (LL) 1928
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -33110.0 ( -44.03 by residue)
QMean score : 0.122
(partial model without unconserved sides chains):
PDB file :
Tito_4TYZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TYZ-query.scw
PDB file :
Tito_Scwrl_4TYZ.pdb
: