Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MILD---------YNKLKQETKAIVVDI-IERSALKKGQIFVLGLSSSEVSGGLIGKNSSSEIGEIIVEVILKELHSRGIYLAVQGCEHVNRALVVEAELAERQQLEVVNVVPNLHAGGSGQVAAFKLMTSPVEVEEIVAHAGIDIGDTSIGMHIKRVQVPLIPISRELGGAHVTALASRPKLIGGARAGYTSDPIRKF |
| 1Q0P Chain:A ((15-223)) | SMNIYLVLDGSDSIGASNFTGAKKSLVNLIEKVASYGVKPRYGLVTYATYPKIWVKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLH------NMGGDPITVIDEIRDL-LYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALASKKD---NEQHVFKVKDLS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54364 for 1291 contacts (-42.1/contact) +
2D Compatibility (PS) -18436 + (NN) 1621 + (LL) 792
1D Compatibility (HY) -5600 + (ID) 900
Total energy: -76887.0 ( -59.56 by residue)
QMean score : 0.146
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