Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKLRRFRFPLRFYFTLMFVLTMLFSVLASLLLVAAIVFTFFQGVLTTHVLQVSALAVVFLSLVIASISMWYGSYHLTKPILDISRIVSNVADGDFEGHIYRNSNRRKSYEYYNELDELSESINQMIVSLSHMDHMRKDFITNVSHELKTPIAAVANIVELLQDPELDEETQSELLGLVKTESLRLTRLCDTMLQMSRVDNQETIGELSSVRVDEQIRQAMISLTERWQAKRINFQLD--SKPYTVYSNSDLLMQVWINLLDNAIKYSDDIVDLRVRMEETNNHYLRVIISDKGRGISQYDVQHIFDKFYQADQSHNQQGNGLGLAIVKRIIV-LCKGRISVSSQFEIGTEFCVELPLS |
| 3A0R Chain:A ((131-345)) | ---------------------------------------------------------------------------------------------------------------------------------------ILGEMTARVAHEIRNPITIIGGFIMRMKKHLDDPETLKKYINIITNELSRLETIVKEILEYSKER----VLEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSED-MYTKVRVSVWNSGPPIPEELKEKIFSPFFTT----------LGLSICRKIIEDEHGGKIWTENR-ENGVVFIFEIPKT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A0R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112855 for 1427 contacts (-79.1/contact) +
2D Compatibility (PS) -21275 + (NN) -6382 + (LL) 12648
1D Compatibility (HY) -15600 + (ID) 2500
Total energy: -145964.0 ( -102.29 by residue)
QMean score : 0.447
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