Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVKINTRDGQIE-LSDDVIATVVGGSATEIFG-VV-GMASKSAIKDNFQALLRKENYAKGVVVRSSEAGIAVDVYTVMSYGVKI-SEVSKNIQERVK-----FNLENQLGLSADM-VNVYVQSIKVVGED
3IQT Chain:A ((1-123))
SNAVNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYS------GVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREASKILG--
General information:
TITO was launched using:
RESULT:
Template:
3IQT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26967 for 754 contacts (-35.8/contact) +
2D Compatibility (PS) -11593 + (NN) -734 + (LL) 636
1D Compatibility (HY) 2400 + (ID) 900
Total energy: -37158.0 ( -49.28 by residue)
QMean score : 0.185
(partial model without unconserved sides chains):
PDB file :
Tito_3IQT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IQT-query.scw
PDB file :
Tito_Scwrl_3IQT.pdb
: