Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEMKQISETTLKITISMEDLEDRGMELKDFLIPQEKTEEFFYSVMDELDLPENFKNSGMLSFRVTPKKD----RIDVFVTKSELSKDLNLEELADLGDISKMSPEDFFKTLEQSMLEKGDTDAHAKLAEIENMMDKATQEVVEENVSEEQPEKEVETIGYVHYVFDFDNIEAVVRFSQTIDFPIEA---SELYKNGKGYHMTILLDLENQPSYFANLMYARMLEHANVGTKTRAYLKEHSIQLIHDDAISKLQMIEMG |
| 3PKV Chain:A ((2-222)) | ---TSIKQLTLYTA-ELDRMLAFYTNMLGAQHVHEQADAFTIQL-----------GVSQIQFRAAADGTKPFYHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVEDPSGN----IIELISRQQAAPVLDKPFSADQ----LLSIGEINITTS-DVEQAATRLKQAELPVKLDQIEPAGLNFIGDQDLFLLLGPPGRRWLFSERVAVIYPLQMELDNGVSLAITETGELVIL------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 27975 for 1695 contacts (16.5/contact) +
2D Compatibility (PS) -21816 + (NN) 2544 + (LL) 3188
1D Compatibility (HY) -3600 + (ID) 1300
Total energy: 6991.0 ( 4.12 by residue)
QMean score : 0.046
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