Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFSEIFKFCISILWYFILTKNKGVVVMRAWKGIVLILSSIVVTLVAWQNAGLSEFVVPGLALTSLSLTFLLSTKFRILESYFQGIENMYFYHKVMAVFSMILLLLHKIGLGQGGHGSEFAKTIGSAGLYLFLSIVFVAYFGNFLKYEIWRFIHRFVYLVYILGLVHTFLILGDRILGNTLLSLIVLGYAVIGVISGFYIIFLYSRMRFRRVGYVQKVTHL-----NHDTTEIEIAMK-RPYRYDYGQFTFLKIYQAG---FESAAHPFSISGGHD------RVIFLTVKAS------------GDYTKSIYKQLKVG-TKIALDRAYGHMLFDK--DKKEQVWIAGGIGITPFISFIRENSIL-------TKRVDFFYTFSNQDNLIYQDMLESYAKANP-NFKLHLNNSSL-----------QGRLDF--SQS---VFEGQPTIFMCGPTSMTSTYAKVFRQKDAKSRLVYEGFSFRDSWLSIFLLKTFDKVYSNLIK |
| 2B5O Chain:A ((122-374)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGEDKNGKPHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLC-NLPVGTDDVKITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYTANILYKDDFEKMAAENPDNFRLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQKPNTHVYMCGLKGMQPPIDETFTAEAEKRGLNWEEMRRSMKKEHRWHVEVY--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B5O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118079 for 1526 contacts (-77.4/contact) +
2D Compatibility (PS) -21255 + (NN) -84 + (LL) 20808
1D Compatibility (HY) -12400 + (ID) 2050
Total energy: -133060.0 ( -87.20 by residue)
QMean score : 0.529
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