Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDAKTKYKAKKIKAVFFDIDDTLRVKDTGYMPPSILKVFKALKDKGIVVGIASGRARYGVPKEVQDLNADYCVKLNGAYVKDKDKNIIFHRPIPAEYVEQYKKWADTVGIKYGLAGRHEAVLSDRDDLVNDAIDIVYSDLEVNPDFNKEHDIYQMWTFEDKGDSLHLPEPLDEHLRLIRWHDHSSDVVLKGTSKALGVSKVVEHLGLKPENILVFGDELNDLELFDYAGLAVAMGVSHPEAQKKADFITKKVEEDGILYALEELGLIEKELTFPQVDIENTEGPVAVIKTNHGDMTVKLFPDHAPKTVANFIGLA--KQGY-YDGIIFHRIIPDFMIQGGDPTGT-GMGGESIYGESFEDE-FSEELYNVRGALSMANAGPNTNGSQFFIVQNTKIPYAKKELERGGWPTPIAELYAGQGGTPHLDRRHSVFGQLVNQSSFEVLDEIAAVETGSQDKPLEDVVILTIEVKE |
| 2RMC Chain:E ((22-164)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GRIVIGLFGNVVPKTVENFVALATGEKGYGYKGSIFHRVIKDFMIQGGDFTARDGTGGMSIYGETFPDENFKLKHYGI-GWVSMANAGPDTNGSQFFIT-----------LTKPTW----------------LDGKHVVFGKVLD--GMTVVHSIELQATDGHDRPLTDCTIVNSGKID |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RMC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57185 for 1019 contacts (-56.1/contact) +
2D Compatibility (PS) -14659 + (NN) -7240 + (LL) 20192
1D Compatibility (HY) -14800 + (ID) 3700
Total energy: -77392.0 ( -75.95 by residue)
QMean score : 0.497
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