Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKITKIEKKKRLYTLELDNTENLYITEDTIVHFMLSKGMIVNAEKLENIKKFAQLSYGKNLGLYYISFKQRTEKEVIKYLQQH---DIDSKIIPQIIDNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGIKSKIIESELQAINFQDLASKISQKLYKKYQNKLPLKALKDKLMQSLTTKGFDYQIAHTVIQNLEIEKDQELEEDLIYKELDKQYQKLSKKYDQYELKQRIINALMRKGYQYEDIKSALREYL |
| 3HHH Chain:A ((17-64)) | ------------------------------------------------------------LVLAIIQRKETYGYEITKILNDQGFTEIVEGTVYTILLRLEKNQWVIAEKKPSEPMRKFYRLTSSGEAELADFWQRWTLLSKQVNKMKKN--------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17340 for 257 contacts (-67.5/contact) +
2D Compatibility (PS) -4589 + (NN) 372 + (LL) 14044
1D Compatibility (HY) -4000 + (ID) 550
Total energy: -12063.0 ( -46.94 by residue)
QMean score : 0.664
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