Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLASGEIGEVISISSTTAYPNIDHVTWFRELELGGGTVHFMAPYALSYLQYLFDATITHASGTA-TFPK-----GQSDSQSKLLLQLSNGVLVDIFLTTRLN--LPHEMIIYGTEGRLIIPHFWKTTHAKLVRNDTSARTI-----QVDMVSDFEKEAYHVSQMILEGQRVSHIMTPQLTLSGVKIIEDLYRSWGK |
| 3EZY Chain:A ((2-325)) | --SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTIGKPHVLRITSRDPAPPPLDY---IRVSGGIFLDMTIHDFDMARYIMGEEVEEVFADGSVLVDEEIGKAGDVDTAVVVLRFKSGALGVIDNSRRAVYGYDQRIEVFGSKGRIFADNVRETTVV-LTDEQGDRGSRYLYFFLERYRDSYLEELKTFIKNVKSGE--PPAVSGEDGKMALLLGYAAKKSLEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EZY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201922 for 2577 contacts (-78.4/contact) +
2D Compatibility (PS) -33898 + (NN) -11382 + (LL) 872
1D Compatibility (HY) -11600 + (ID) 2450
Total energy: -260380.0 ( -101.04 by residue)
QMean score : 0.496
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