Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVSALLKFDFSVVRHNMAIKLNNNFLIIMGTSFLLLLAYHIKKEGKEVLSSLFVISNFFDNSTLFFVIIVVMRVVAGTFGGRPLKTLDGKTTRPTTDKVKGAIFNMIGPFFEGGRVLDLFSGSGSLAIEAISRGMDQAVLVEKDRRAQVVIQENIAMTKSP-EQFQLLKMEANRALEQ--LTGQFDLVLLDPPYAKEEIVKQIQIMD-SK--GLLGDDIMIVCETDKSVDLPEEIASFGIWKQKIYGISKVTVYVR |
2IFT Chain:A ((13-192)) | -----------------------------------------------------------------------VRIIAGLWRGRKLPVL---------DRVKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFHFNLA---EQAISLLCENNWLKPNALIYVETEKDKPLIT-PENWTLLKEKTTGIVSYRLYQN |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IFT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31789 for 1313 contacts (-24.2/contact) +
2D Compatibility (PS) -17420 + (NN) -1310 + (LL) 7348
1D Compatibility (HY) 0 + (ID) 1050
Total energy: -44221.0 ( -33.68 by residue)
QMean score : 0.246
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