Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVQSYSKNANHNMRRPVVKEEIVQYMRQHQKQNNGCLAELEAFAKQENI--PIIPHETATYFRFLMQTLQPKHILEIGTAIGFSALLMAENAP-EAKITTIDRNEEMIVLAKENFAKYDNHNQITLLEGDAVDVLQT-----LDKSYDFVFMDSAKSKYIVFLPQVLKHLDVGGVVVLDDIFQGGDIAKPIDEVRRGQRTIYRGLQRLFDSTLRHPDLTATLVPLGDGLLMIRKNAEHIVLED
3R3H Chain:A ((7-220))
----------------SLTPELYKYLLDISLREHPALAALRKETSTMELANMQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDT-----SGQTREIKKLNQVIKNDSRVFVSLLAIADGMFLVQPI--------
General information:
TITO was launched using:
RESULT:
Template:
3R3H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118565 for 1650 contacts (-71.9/contact) +
2D Compatibility (PS) -22819 + (NN) -15000 + (LL) 2068
1D Compatibility (HY) -12800 + (ID) 2500
Total energy: -169616.0 ( -102.80 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_3R3H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R3H-query.scw
PDB file :
Tito_Scwrl_3R3H.pdb
: