Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQITFKKVGLDNVNILQNLAIETFRQTFSHDNSEEQLQAFFNESYTLPVLKSEITHAESDTYFVYLDTDLVGYLKVNWGSQQTEKDLDKAFEIQRIYLLDAYQGKGIGKATFEFALDLAYKSGLDWAWLGVWEFNHKAQAFYAKYGFEKFSEHQFSVGDKVDTDWLLRKSLH
2FIW Chain:A ((5-160))
MSTPALRPYLPEDAAVTAAIFVASIEQLTADDYSEEQQEAWASAADDEAKFAARL--SGQLTLIATLQGVPVGFASLKG-----------PDHIDMLYVHPDYVGRDVGTTLIDALEKLAGARGALILTVDA---SDNAAEFFAKRGYVAKQRNTVSINGEWLANTTMTKSL-
General information:
TITO was launched using:
RESULT:
Template:
2FIW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72077 for 1208 contacts (-59.7/contact) +
2D Compatibility (PS) -17223 + (NN) -7199 + (LL) 880
1D Compatibility (HY) -2800 + (ID) 1500
Total energy: -99919.0 ( -82.71 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_2FIW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FIW-query.scw
PDB file :
Tito_Scwrl_2FIW.pdb
: