Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLISWNIDSLNAALTSESTRALMSRQVIDTLVAEDADIIAIQETKLSAKGPTKKHLEVLETYFPEYDLVWRSSVEPA-RKGYAGTMFLYRKGLNPIVSFPEIDAPTTMDNEGRIITLELENCYITQVYTPNAGDGLKRLGDR-QIWDIKYAEYLATLDSQKPVLATGDYNVAHKEIDLANPSSNRRSAGFTDEERQGFTNLLAKGFTDTFRYLHGDVPNVYSWWAQRSRTSKINNTGWRIDYWLTSNRVADKITKSEMIHSGDRQDHTPIILEIEL |
3G4T Chain:B ((4-251)) | LKIISWNVNGL---------RAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRK-LRHVEGY--------RSFFTPAERKGYSGVA-MYTK--VPPSSLREGFGVERFDTEGRIQIADFDDFLLYNIYFPNGKMSEERLKYKLEFYDAFLEDVNRERDSGRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENGYVDTFRMFNSD-PGQYTWWSYRTRARE-RNVGWRLDYFFVNEEFKGKVKRSWILSDVMGSDHCPIGLEI-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3G4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -52772 for 1995 contacts (-26.5/contact) +
2D Compatibility (PS) -26717 + (NN) -13455 + (LL) 2128
1D Compatibility (HY) -18400 + (ID) 4300
Total energy: -113516.0 ( -56.90 by residue)
QMean score : 0.475
|
|
|