Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILREFCAENLTDLTRLDKAIISRVELCDNLAAGGTTPSYGVIKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVL----GILTSNN-HIDTEAIEQLLPATQ--GLPLVFHMA-FDVIPKSDQKKAIDQLVALGFTRILLHGSSNGEPIIENIKHIKALVEYANNRIEIMVGGGVT-AENYQYICQETGVRQAHGTRITQ
1MZH Chain:A ((27-205))
--------------LKSEELGIYAVCVN-----------PYHVKLASSIA--KKVKVCCVI-----GFPLGLNKTSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSAVHKVIVETPYLNE---EEIKKAVEICIEAGADFIKTSTGF--APRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIE-AGADRIGTSSGIS
General information:
TITO was launched using:
RESULT:
Template:
1MZH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130401 for 1344 contacts (-97.0/contact) +
2D Compatibility (PS) -18247 + (NN) -3880 + (LL) 1220
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -155858.0 ( -115.97 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_1MZH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MZH-query.scw
PDB file :
Tito_Scwrl_1MZH.pdb
: