Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTYKDYTGLDRTELLSKVRHMM----SDKRFNHVLGVERAAIELAERYG-YDKEKAGLAALLHDYAKELSDDEFLRLIDKYQLDPDLKKWGNNIWHGLVGIYKIQEDLAIKD---QDILAAIAKHTVGSA--QMSTLDKIVYVADYIEHNRDFPGVEEARELAKVDLNKAVAYETARTVSFLASKAQPIYPKTIETYNAYIPYLD
2QGS Chain:A ((5-126))--------MKIKKAYEYMKSFHQHDTTGHDIAHVERVYNNACYIAKRENITDTLVIELSSLLHDTVDSKLTD--------------------EILAYDQLKQFLST-LDLSSEISQQVLYIIKHMS----HVKLSIDGEIVRDADRLDAIGAIGIARTFQFSGHFGEPMWTETKLSNEELHTSLVEELDNSAIKHFYEKLFKLKD


General information:
TITO was launched using:
RESULT:

Template: 2QGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40558 for 751 contacts (-54.0/contact) +
2D Compatibility (PS) -11303 + (NN) -6350 + (LL) 1556
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: -61405.0 ( -81.76 by residue)
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_2QGS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QGS-query.scw
PDB file : Tito_Scwrl_2QGS.pdb: