Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEILVLGAGYAGLKAVRNLQKQSGDFHITLVDMNDYHYEA-TELHE-VAAGSQ------P-------KEKITFP---------IKDVINTNKVNFMQD-EVLKVDAENKTVTVKNNGELHYDYVVVALGFVSETFG-IKGAMENA----LQMTNISQAENIHNHIVNTMKLYRETKDENLLKLLVCGAGFTGIELAGAMVDERPKYAALAGVKPEQIEIICVEAATRILP-MFDDELAQYGVNLIKDLGINLMLGSMIKEIKPGE--V--VYGTSKEDEELKSITAGTIIWTTGVSGSPVMGE-SGFD-QR-RGRVMVNSDLRDPKYDNVYVIGDVSAFMDTESGRPFPTTAQIATRMGAHVAKNLLHQIKGEATEDFSYSPQGTVASVGNTHGLGVVGKTKIKKYPASVMKKIIMNKSLVDMGGLKELLAKGRFDLYH |
1M6I Chain:A ((11-352)) | HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFS-PNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKIS------------REVKSITIIGGGFLGSELACALGRKARAL---------GTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVG-VSSGKLLIKLKD--G---RKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA--RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSESETESEASYGK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M6I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239794 for 2475 contacts (-96.9/contact) +
2D Compatibility (PS) -32692 + (NN) -6870 + (LL) 1912
1D Compatibility (HY) -13200 + (ID) 2600
Total energy: -293244.0 ( -118.48 by residue)
QMean score : 0.501
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