Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLHFENDYNKG-AHPELLNALIETNDQGLSGYGTDSYCQQAADKIREVCS------CPQA-EVEFLVGGTQTNQVVISSMLASYEGVIAAETGHVSSHEAGAIEFSGHKVLTLPSHNGKLLASEVATYIETFYADGNYQHMVFPGMVYISHP-TEYGTLYSKAELEELSKICKHYQIPLFIDGARLGYGLAAKDT-DVDFPTIAALSDVFYIGGTKMG--ALAGEAVVFTKKNRPKQFTTIVKQHGALLAKGRLLGLAFDRFFTD--DLYLKIGKHAIDLAEELKIILE-EKGYSFYLKSPTNQQFVIVEN--------TKLTDL-AK-NVAYSFWEKYD-DHHTVIRLATSWSTSREDVTALRNVL |
| 2X5D Chain:A ((40-391)) | -IDLSMGNPDGPTPPHIVEKLCTVA--------TSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIH--IYGAVIAGAQVRSVPLVPGIDFFNELERAIRES--------IPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLS-SYNMAGWRIGFMVGNPELVSALARIK--SYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA-GWMVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALI--ENRDRLRQAVRGI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2X5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -161611 for 2678 contacts (-60.3/contact) +
2D Compatibility (PS) -34085 + (NN) -10998 + (LL) 728
1D Compatibility (HY) -10000 + (ID) 1900
Total energy: -217866.0 ( -81.35 by residue)
QMean score : 0.479
|
|
|