Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKIVVALGGNALGNSPEE-----QLRLVKHTAKSLVALIKKGHEIVVSHGNGPQVGAINLGMNFAAESGQGTNFPFPECGAMSQGYIGYHLQQSLLNELRQEGINKEVATIITQIEVDESDQAFSAPTKPIGTFY-DKETSEKIAIEKGYTFVEDAGRGYRRVVASPEPKKIIEINSIKTLIENDTLVIAGGGGGIPVINKGGY-EGIAAVIDKDKSSALLAGELAADQLIILTAVDYVYTQFGKENQKALTEVNENQMIDYVNQGEFAKGSMLPKVIACMSFLDHNPKGTALITSLNGLEDALDGKLGTRITK |
| 3KZF Chain:D ((8-316)) | ---VVIALGGNAMLQAKEKGDYDTQRKNVEIAASEIYKIHKAGYKVVLTSGNGPQVGAIKLQNQAAA--GVSPEMPLHVCGAMSQGFIGYMMSQAMDNVFCANNEPANCVTCVTQTLVDPKDQAFTNPTKPVGRFYTE-------------ILREDAGRGWRVVVPSPRPLEIVEYGVIKTLIDNNVLVICTNGGGIPCKRENKVISGVDAVIDKDLATSLLAKTLNSDYLMILTDVLNAC-------ERKLEEIKLSEILALEKDGHF--GSMGPKVRAAIEFTQATGK-MSIITSLSTAVDALNGKCGTRIIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144610 for 2444 contacts (-59.2/contact) +
2D Compatibility (PS) -30548 + (NN) -15604 + (LL) 1748
1D Compatibility (HY) -23600 + (ID) 6400
Total energy: -219014.0 ( -89.61 by residue)
QMean score : 0.461
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