Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDTKMLRA----NFQEIKAKLVHKGEDLTDFDKFEALDDRRRELIGKVEELKGKRNEVSQQVAVLKREKKDA------------------------DHIIKEMREVGEEIKKLDEELRTVEAELDTILLSIPNIPHESVPVGETE-DDNVEVRKWGEKPSFAYEPKPHWDIADELGILDFERAAKVTGSRFVFYKGLGARLERALYNFMLDLHVDEYNYTEVIPPYMVNRASMTGTGQLPKFEEDAFKIREEDYFLIPTAEVPITNMHRDEILSGDSLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPE--DSYEELEKLTNQAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSQDTYREISSCSNFEAFQARRANIRFRREAK-GKPEHVHTLNGSGLAVGRTVAAILENYQQEDGSVVIPKVLRPYMGNR--EVMKP |
| 3VBB Chain:A ((2-469)) | VLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSKTIGEKMKKKE--DESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTV--RKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLG-SRGYIPIYTPFFMRKEVMQEVAQLS-FDEELYKVI-DEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGS----TRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQT--MDKVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFMPPGLQELIP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VBB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132899 for 3247 contacts (-40.9/contact) +
2D Compatibility (PS) -44363 + (NN) -20068 + (LL) 472
1D Compatibility (HY) -27600 + (ID) 7200
Total energy: -231658.0 ( -71.35 by residue)
QMean score : 0.417
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