Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIKEIIVVEGRDDTARIKLAV-----DADTIETNGSAIDDHVIDQIRLAQK--TRGVIILTDPDFPGEKIRKTISEAVPGCKHAFLPKHLAKPKNKRGIGVEHASVESIRACLENVHEEMEAQPSDISAEDLIHAGLIGGPAAKCRRERLGDLLKIGYTNGKQLQKRLQMFQIKKSDFMSALDTVMREEQNE |
| 2Q2E Chain:A ((195-275)) | --ASMIIAIETGGMYARLMENGFDEAYNAILVHLKGQ-PARSTRRIIKRMNEELGIPVAVFTDGDPWSYRIYASVA--------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Q2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -19585 for 391 contacts (-50.1/contact) +
2D Compatibility (PS) -7234 + (NN) -3924 + (LL) 8392
1D Compatibility (HY) -400 + (ID) 650
Total energy: -23401.0 ( -59.85 by residue)
QMean score : 0.536
|
|
|