Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEVGSKLQGKITGITNFGAFVELPG---GSTGLVHISEVAD-NYVKDINDHLKVGDQVEVKVINVEKDGKIGLSIKKAKDRPQARPRNDFRPKESFEQKMNKFLKDSEDRLSSLKRNTESKRGGRGARRG
2EQS Chain:A ((262-345))
--PTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTG-TKTSLSMKDVDQETGED---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2EQS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35757 for 546 contacts (-65.5/contact) +
2D Compatibility (PS) -8225 + (NN) 945 + (LL) 1576
1D Compatibility (HY) -7200 + (ID) 1450
Total energy: -50111.0 ( -91.78 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_2EQS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EQS-query.scw
PDB file :
Tito_Scwrl_2EQS.pdb
: