Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSNPQVHFDLNEQGKLDVRRAVGTNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGVGVLVNPDNTILAAGGFIIQLMPGTDDETITKIEQRLSQVEPISKLIQKGLTPEEILEEVLGEKPEILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTTR |
2JR7 Chain:A ((21-59)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TYFYPCPCGD------NFSITKEDLEN----GEDV-ATCPSCSLIIKVIY------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2JR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -12649 for 218 contacts (-58.0/contact) +
2D Compatibility (PS) -4473 + (NN) -1172 + (LL) 16740
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -4704.0 ( -21.58 by residue)
QMean score : 0.466
|
|
|