Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQKG
3IEW Chain:B ((24-179))
-FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLL---DADVLLHAITDALFGAAALGDIGRHFS-----FKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR-
General information:
TITO was launched using:
RESULT:
Template:
3IEW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124440 for 1244 contacts (-100.0/contact) +
2D Compatibility (PS) -15852 + (NN) -7505 + (LL) -256
1D Compatibility (HY) -14400 + (ID) 4450
Total energy: -166903.0 ( -134.17 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_3IEW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IEW-query.scw
PDB file :
Tito_Scwrl_3IEW.pdb
: