Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLQNNKGKFNKEQFCQLEDEQVIEKVHVGDSDALDYLITKYRNFVRAKARSYFL---IGADREDIVQEGMIGLYKSIRDFKEDKLTSFKAFAELCITRQIITAIKTATRQKHIPLNSY----------------------------------------------ASLDKPIFDEESDRTLLDVISGAKTLNPEEMIINQEEFDDIEMKMGELLSDLERKVLVL-YLDGRSYQEISDELNRHVKSIDNALQRVKRKLEKYLEIREISL |
1RP3 Chain:A ((3-234)) | --------------------------NPYSNQIEREELILKYLPLVKAIATNIKKHLPEDVDIRDLISYGVIGLIKAVDNLSTENPKRAEAYIKLRIKGAIYDYLRSLDFGSRQVREKERRIKEVVEKLKEKLGREPTDEEVAKELGISTEELFKTLDKINFSYILSLEEVFRDF--ARDYSELIP--SSTNVEEEVIKRELTEKVKEAV-SKLPEREKLVIQLIFYEELPAKEVAKILETSVSRVSQLKAKALERLREMLSN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40292 for 1168 contacts (-34.5/contact) +
2D Compatibility (PS) -19252 + (NN) -2809 + (LL) 2292
1D Compatibility (HY) -7200 + (ID) 1850
Total energy: -69111.0 ( -59.17 by residue)
QMean score : 0.434
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