Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLKCTISYDGHLFNGYQVQPGKRTVQDELEKALAVLHKSKDRIPVVSSGRTDSGVHAAGQVIHFDTPLSIPAERWPYALNALLPDDIAVKQAEIADDGFHARFSAVKKEYRYFVYTEKHPDVFKRHYAYHFSYRLNVQDMREAAKHL-IGTH-DFTSFCAAKTEVQDKVRTIYELDWTETADGLQMRITGSGFLYNMVRIIAGTLLDAGIGKISPDEVKSMLEAKDREAAGRTAPGHGLYLWNVYYDN |
3PF6 Chain:A ((24-41)) | ------------------------------------------------------------------------------------------------------------------------------------------DALEEARLLFPGGTHHDF--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2166 for 50 contacts (-43.3/contact) +
2D Compatibility (PS) -1799 + (NN) -1572 + (LL) 15336
1D Compatibility (HY) -800 + (ID) 350
Total energy: 8649.0 ( 172.98 by residue)
QMean score : 0.831
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