Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNALVAHNSKAWDKKVETGNEWTVAVEQQVIEQAKKGNWDIRVTPMKDVPKDWFPPIKGLKVLCLASGGGQQGPVLAAAGADVTVLDNSEKQLNQDRMIAERDGL--TIHTVKGSMDDLSVFNDESFDVIVHPVA-NVF---VENVLPVWKEAYRVLKRNGILISGFVNPVVFLFDTEL-E---QQ-GVLKVKHSIPYADPEDLPKHKVKK-----LIENNEALEFGHSLEDQIKGQIDAGFIVTGFYEDKGGFVLDQYIHTYSATRSVKV |
| 4HGZ Chain:A ((61-273)) | --------------------------------------------------------AAARPVLELGVGTGRVAFPLADLGVEVHGVESSEPMLDKLREKAAAHPNGNLVVPVLGNFAKL-DLGEQRYSVVFAAFNTLFCLLGQDEQIDCMRQARELLEPGGTFVVQCLNPAGQRLATGNTFGTVELEDTAVHLEASKHDPLAQTLSAHHIVLSEGGGIRLFPYRLRYAYPAELDLMANVAGLELVERHADFERRRFDA-SSRYHVSVYRAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64121 for 1430 contacts (-44.8/contact) +
2D Compatibility (PS) -20939 + (NN) 1931 + (LL) 3852
1D Compatibility (HY) 2000 + (ID) 1500
Total energy: -78777.0 ( -55.09 by residue)
QMean score : 0.352
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