Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MKIYGIYMDRPL---SQEETDRLMSFVSAEKREKCRRFYHKEDAHRTLLGDVLVRSVISEQYQLNKADIRFSAQEYGKPCI-----PDLPNAHFNISHSGHWVIGAF-DSDPIGVDIEKMKPIS-------LGIAERFFSKNEYSDLLS-KHKDEQNDYFYHLWSMKESFIKQEGKGLSLPLDSFSVRLHEDGR---------VSVELPEHHTPCFIKTYEVDPGYKMAVCAARPDFPEDITMISYEALL------------------------------ |
| 2BYD Chain:A ((18-318)) | LYFQGHMEGVRWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAEKLNIPWNHIRLQRTAKGKPVLAKDSSNPYPNFNFNISHQGDYAVLAAEPELQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEWETIRSFKDEWTQLDMFYRNWALKESFIKAIGVGLGFELQRLEFDLSPLNLDIGQVYKETRLFLDGEEEKEWAFEESKIDEHHFVAVALRKQ---RQFTILNFNDLMSSAVPMTPEDPSFWDCFCFTEEIPIRNGTK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107436 for 1637 contacts (-65.6/contact) +
2D Compatibility (PS) -23947 + (NN) -10227 + (LL) -84
1D Compatibility (HY) -15600 + (ID) 2850
Total energy: -160144.0 ( -97.83 by residue)
QMean score : 0.471
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