Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNAVIYQPVQIEYLKKTSDLFSEQQLADSFVLIFHLKGNGYISIGTNTNPLQKKTLYVCPPNETFGFTPAADGHIDACIIRLLSYIKETGQDIFTPCTESELAKLKLMNVSHIENLAVRLQELAALWNESSQLSQLKCVIEVQSLIYDLFTASLSDQTDTHSAIEKTKHYIETHADTKITLAQLSQMAGISAKHYSESFKKWTGQSVTEFITKTRITKAKRLMAKSNCKLKEIAHQTGYQDEFYFSRIFKKYTGCSPTSYMKKRRKKIAAYGRGTMGHLIPLHHI--PFAAALHPKWTSYYYQHYSTDIPVQLSAYRFNEKWEENLYTLSQAEPDVIVSMDSI-SPEEQDRLNRIA-EVMYLPSE---ESWRTHFLQTASFLKEESEAEKWLADYDQQTTAAKKTLQHV----QGLRFLFLRLH-KQNFYLAHNRSVREVFFGDLGFSSATTADTPSEQAISLENIANYQADCMMLFLFKEPETIAYYQQLQQTEAWQNLSAVRDNRVYLLSLDPWNE-YSACGHERIVQQTVSLLSGDCP |
| 2R79 Chain:A ((1-263)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPQRWVSAGGSLSEWVVALGGESKLVGVDTTSQHPQ-----ALKQLP------SVGYQRQLAAEGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGVPQRAEAAELDYRQRLRRQADWIAAAQKSQPAPGVLLVIGNAGGQLLVAGRNTGGDWVLNRAGARNLATH--EGYKPISVEALAALDPVAVVIADRSLEGDAARAALLKQNPGLAPTRAARDGRLLVLDPTLLVGGLGPRLP-DGLAALSAAF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140440 for 2014 contacts (-69.7/contact) +
2D Compatibility (PS) -25761 + (NN) -7373 + (LL) 20816
1D Compatibility (HY) -4800 + (ID) 1600
Total energy: -159158.0 ( -79.03 by residue)
QMean score : 0.425
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