Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKTLFIFSAILTLSIFAPNETFAQTAGNLIEPKIINAETAQFSTKKLRKVDQMIERDIA-AGFPGAVLVVVKDGRIIKKAAYGYSKKYEGSELLRRPAKMKTRTMFDLASNTKMYATNFALQRLVSQGKLDVYEKVSAYLPGFKDQPGDLIKGKDKIRVIDVLQHQSGLPSSFYFYTPEKAGKYYSQERDKTIEYLTKIPLDYQTGTKHVYSDIGYMLLGCIVEKLTGKPLDVYTEQELYKPLRLKHTLYNPLQKGFKPKQFAATERMGNTRDGVIQFPNIRTNTLQGEVHDEKAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNISLFDQKTADLFTAPS----------ATDPTFALGWRRNGSKSMEWMFGPHASENAYGHTGWT---GTVTIIDPAYNLGIALLTNKKHTPVIDPEENPNVFEGDQFPTGSYGSVITAIYEAME |
| 3RJU Chain:A ((7-334)) | ------------------------------------------------SQIVDQYAEHIFYNSGAVGMALVVIDNNQVV-NRSFGETQP-------GNNIRPRPDSLIRIASITKLMT-SEIMVKLADDGIVKLTDPLKKYAPKGVNVPS--YSAKQPIRLLHLASHTSGLPREQPGGPQKRPV-FTWPTKDNRWQWLKLAKVTVPPGVKAAYSNLAYDLLADALSRAAGKPYAHLLRDKITAPLGMKNTTLTPTAEQC--KRLMI----GVGSS-------------------RC--GNTVAAAGSGGIYSTPEDMQHWMQQFLASDNSAPKRSAKREQALYFQRGDLVSLKGMDVAGQADALGLGWVYMAPK--------ADLPGIMQKTGGGGGFITYMAMVPEKNIGVFVVVTRSQLTK-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RJU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96422 for 2644 contacts (-36.5/contact) +
2D Compatibility (PS) -33198 + (NN) -13373 + (LL) 8336
1D Compatibility (HY) -10400 + (ID) 3250
Total energy: -148307.0 ( -56.09 by residue)
QMean score : 0.473
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