Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKYFGTDGVRGVANSELTPELAFKVGRFGGYVLTKDKQRPKVLIGRDTRISGHMLEGALVAGLLSIGAEVMRLGVISTPGVSYLTKAMDAEAGVMISASHNPVQDNGIKFFGGDGFKLSDEQEAEIERLMDEPEDKLPRPVGADLGLVNDYFEGGQKYLQFLKQTADEDFTGIHVALDCANGATSSLATHLFADLDADVSTMGTSPNGLNINDGVGSTHP---EALSAFVKEKN-ADLGLAFDGDGDRLIAVDEKGNIVDGDQIMYICSKHLKSEGRLKDDTVVSTVMSNLGFYKALEKEGIKSVQTAVGDRYVVEAMKKDGYNVGGEQSGHLIFLDY-NTTGDGLLSAIMLMNTLKATGKPLSELAAEMQKFP-QLLVNVRVTDKYK--VEENEKVKA----------VISEVEKEM-NGDGRILVRPSGTEPLVRVMAEAKTKELCDEYVNRIVEVVRSEMGLE |
| 1P5D Chain:X ((10-456)) | PASIFRAYDIRGVVGDTLTAETAYWIGRAIGSESLAR-GEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANVLEGKSGVMLTGSHNPPDYNGFKIVVA-GETLANEQIQALRERIEKND--L----ASGVGSVEQV-DILPRYFKQIRDDIA-MAKPMKVVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVK-AENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRN--PGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIE--ALQRDAQWGEGNITTLDGVR--VDYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRNQLKAVD--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159398 for 3962 contacts (-40.2/contact) +
2D Compatibility (PS) -46175 + (NN) -23320 + (LL) 904
1D Compatibility (HY) -23200 + (ID) 5900
Total energy: -257089.0 ( -64.89 by residue)
QMean score : 0.513
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