Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METNKPTLYWSLLMFKDWNFYIASTLKGLVFVGSQNKP-IEELFEWARKRFPGSLLVEDDDKLEPYAVEITQYLEGKRK-NF--TVPVEYAGTQFQLAVWNALCEIPYGQTKSYSDIANDINKPAAVRAVGAAIGANPVLITVPCHRVIGKNGSLTGYRGGFEMKTLLLDLEKRASSEMDVPH
2G7H Chain:A ((6-162))
-----------------EEYFIGMIFKGNQLVRNTIPLRREEIFNFMD---GEVVSNPEDEHLKVAEIILKLYFAEIDDKKVRELISYKLEVPEFTKKVLDIVKDIEFGKTLTYGDIAKKLNT--SPRAVGMALKRNPLPLIIPCHRVVAKNS-LGGYSYGLDKKKFILERERLNMVSFK---
General information:
TITO was launched using:
RESULT:
Template:
2G7H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31813 for 1027 contacts (-31.0/contact) +
2D Compatibility (PS) -15555 + (NN) -6 + (LL) 1704
1D Compatibility (HY) -12000 + (ID) 2050
Total energy: -59720.0 ( -58.15 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_2G7H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G7H-query.scw
PDB file :
Tito_Scwrl_2G7H.pdb
: