Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKWIYVVLVLSIAGIGGFSVHAASSAHEKHLNVSKMNVDDEFKDTDGTFILHDLQKDQTFVYNRKRANQRQTPQSTFKVVNALIGLQVKAVRDEYDVKRWDGVKREFESWNRDHTLGSAMRESAIWYYQALARDIGEERMKTWLHTLSYGNEDISGGIDQFWLQSSLTISPLEQETFLEKLAKEELPFDKPVMKIVKRMMIQEEGDHYTLYGKTG--TRLTDMGLGWFVGFIKTEHGSYVFVTNVD----DSGTKAKNITVDILKKYGLITS
4WMC Chain:D ((17-241))---------------------------------------------SQGVVVLWNENKQQGFTNNLKRANQAFLPASTF-IPNSLIALDLGVVKDEHQVFKWDGQTRDIATWNRDHNLITAMKYSVVPVYQEFARQIGEARMSKMLHAFDYGNEDI------FWLDGGIRISATEQISFLRKLYHNKLHVSERSQRIVKQAMLTEANGDYIIRAKTGYSTRI-EPKIGWWVGWVELDDNVWFFAMNMDMPTSDGLGLRQAITKEVLKQEKII--


General information:
TITO was launched using:
RESULT:

Template: 4WMC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1075 -131742 -122.55 -621.42
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain D : 0.75

3D Compatibility (PKB) : -122.55
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.562

(partial model without unconserved sides chains):
PDB file : Tito_4WMC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WMC-query.scw
PDB file : Tito_Scwrl_4WMC.pdb: