Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKGAAFVKKEGLKQKALEIGRVPTHLKLEIEDYGGDDKRAHFCWADPQD--ENTGIIVELGPDGELESLSRDIEPESGERLSEEKLEDIMRQFVETHHPGALSAFVREENDRAYGDKVRFSYVQMEAGLPLPMSGFMADVSLSGEIVYFRYYGEAGSIIKPKRVADVEEALAFIKKDVEFDLLFEVLHRSVYKNGDDQPHLVYEPEGRAITVPADLVQE-EQAVDDDDDYREPESFP-LPLFEGIREKADPDSMIGIENGFVKERE-----ADLGDGRIGIVWRNPDDPVYQPADKSMDSWFKGRTHQVLKTIYNKETGKLEGVMSFMEKKGPLTVTLAECEKIALRFLFALFP-----NADQYFRIRYDEK-DEEENAVAGFTFEAHCHGVPLRFGQIRICVSRQTGYITVYMGPDIDPNKLATIDPVPAISVEQAKSIFWQHFKVE---LGWEREYGDDEEHSYRLVYKPVYPHFIDAHTGEPVFSIW----
4XGC Chain:D ((5-457))--DRELVSIRRFLKERLQRDYT------TLRGYAKERSNVRLLLQRTAEMGESNSLLL-LGPRG---------------SGKTTLINSVLADLLPNKSFGENTLIVHLDGNLHTDDRVALKSITVQMQLENAADGKVFG-SFAENLAFLLQ------CLKSKSVIFILEEFDLFCAHHNQTLLYNLFDVSQSAQA---PICVL-----GVTCRLDVIELLEKRVKSRFSHRQVFLFPSLRRFEDYVDLCRDLLSLPTGNSLLLAAEKIYNLQNIQSGALYFS-RNHFDPGEYGFSPRLRDAWNKQICKVLAT---------QQARSTLQALHDFDISEAYLKNFLFRLVAHLRPQSPHITAEKMAAVGSQFEGDDKIELLCGLSVLELCLIIAIKHHSQI---YDRDSFNFEIIYARF--SKFAKVSTTMQAVERSIVLKAFEHLRIAELIMPLTKVQKEFEMHKLALTYSQIHHCMQRYQALPTEVAQWAQSS


General information:
TITO was launched using:
RESULT:

Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1801 -179221 -99.51 -428.76
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain D : 0.67

3D Compatibility (PKB) : -99.51
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.258

(partial model without unconserved sides chains):
PDB file : Tito_4XGC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XGC-query.scw
PDB file : Tito_Scwrl_4XGC.pdb: