Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFIHIVGPGDSLFSIGRRYGASVDQIRGVNGLDETNIVPGQALLIPLYVYTVQPRDTLTAIAAKAFVPLERLRAANPGISPNALQAGAKITIPSISNYIAGTLSFYVLRNPDLDRELINDYAPYSSSISIFEYHIAPNGDIA-N--QLN--DAAAIE----TTWQRRVTPLATITNLTSGGFSTEIVHQVLNNPTARTNLVNNIYDLVSTRGYGGVTID-FEQVSAADRDLFTGFLRQLRDRLQAGGYVLTIAVPAKTSDNIP---WLRGYDYGGIGAVVNYMFIMAYDWHHAGSEPGPVAPITEIRRTIEFTI-AQVPSRKIIIGVPLYGYDWIIPYQPGTVASAISNQNAIERAMRYQAPIQYSAEYQSPFFRYSDQQGRTHEVWFEDVRSMSRKMQIVREYRLQAIGAWQLTLGFTPGPWLLRKFFTIRKV
3BXW Chain:B ((77-393))-------------------------------------------------------------------------------------------------FAGDVLGYVTPWNSH-GYDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWT-----YDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLLS-KRVGLIHMLTHLAEALHQARLLALLVIPPAITPGTDQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAH-QPGPNAPLSWVRACVQVLDPKSKWRSKILLGLNFYGMDYATSKDAR---EPVVGARYIQTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGV-GVSIWELGQGLDYFYDLL---------


General information:
TITO was launched using:
RESULT:

Template: 3BXW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1610 -203760 -126.56 -674.70
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -126.56
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_3BXW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BXW-query.scw
PDB file : Tito_Scwrl_3BXW.pdb: