Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAHRILIVDDAAFMRMMIKDILVKNGFEVVAEAENGAQAVEKYKEHSPDLVTMDITMPEMDGITALKEIKQIDAQAR--IIMCSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLN
5DGC Chain:A ((6-121))---KFLVVDDQSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWKMPNMDGLELLKTIRADGAMSALPVLMVTAYAKKENIIAAAQAGASGYVVKPFTAATLEEKLNK---


General information:
TITO was launched using:
RESULT:

Template: 5DGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 539 -70827 -131.40 -621.29
target 2D structure prediction score : 0.81
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -131.40
2D Compatibility (Sec. Struct. Predict.) : 0.81
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.556

(partial model without unconserved sides chains):
PDB file : Tito_5DGC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DGC-query.scw
PDB file : Tito_Scwrl_5DGC.pdb: